Home > Computational phenotypes for patients with opioid-related disorders presenting to the emergency department.

Taylor, R Andrew and Gilson, Aidan and Schulz, Wade and Lopez, Kevin and Young, Patrick and Pandya, Sameer and Coppi, Andreas and Chartash, David and Fiellin, David and D'Onofrio, Gail (2023) Computational phenotypes for patients with opioid-related disorders presenting to the emergency department. PLoS ONE, 18, (9), e0291572. doi: 10.1371/journal.pone.0291572.

External website: https://journals.plos.org/plosone/article?id=10.13...

OBJECTIVE: We aimed to discover computationally-derived phenotypes of opioid-related patient presentations to the ED via clinical notes and structured electronic health record (EHR) data.

METHODS: This was a retrospective study of ED visits from 2013-2020 across ten sites within a regional healthcare network. We derived phenotypes from visits for patients ≥18 years of age with at least one prior or current documentation of an opioid-related diagnosis. Natural language processing was used to extract clinical entities from notes, which were combined with structured data within the EHR to create a set of features. We performed latent dirichlet allocation to identify topics within these features. Groups of patient presentations with similar attributes were identified by cluster analysis.

RESULTS: In total 82,577 ED visits met inclusion criteria. The 30 topics were discovered ranging from those related to substance use disorder, chronic conditions, mental health, and medical management. Clustering on these topics identified nine unique cohorts with one-year survivals ranging from 84.2-96.8%, rates of one-year ED returns from 9-34%, rates of one-year opioid event 10-17%, rates of medications for opioid use disorder from 17-43%, and a median Carlson comorbidity index of 2-8. Two cohorts of phenotypes were identified related to chronic substance use disorder, or acute overdose.

CONCLUSIONS: Our results indicate distinct phenotypic clusters with varying patient-oriented outcomes which provide future targets better allocation of resources and therapeutics. This highlights the heterogeneity of the overall population, and the need to develop targeted interventions for each population.


Item Type
Article
Publication Type
International, Open Access, Article
Drug Type
Opioid
Intervention Type
Harm reduction, Screening / Assessment
Date
September 2023
Identification #
doi: 10.1371/journal.pone.0291572
Publisher
Public Library of Science
Volume
18
Number
9
EndNote

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